Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------MGSPEFAINALNSLLKSK-NEVVAVYTKAPKPSGRGQKLTKSPVHIIAEESGIEVCTPTSLKP----LVEQEKFKKFKPDVAVVAAYGLILPKEILNILKYSCINIHPSLLPRWRGAAPIQHTILAGDRKTGISIMQLDGGLDSGPILKQKKFLVEKNDNYKTLHDKLSKLGSNLLMEVIDEIEKHPPLEQSDDGACYADKIEDYKIYASDICEVAYRKVKAFYPKAFVKIEHKRVRILDADFEVDASLTSGQGKIINDNMHISLKSGTLIPKIVQMEGRNSCNIKDFVRGLKFSMVKKFIE |
1FMT Chain:A ((1-206)) | SESLRIIFAGTPDFAARHLDALLSS-GHNVVGVFTQPDRP------LMPSPVKVLAEEKGLPVFQPV----SLRPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADG-------------------------------------------------------------TAKPE---------VQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104128 for 1510 contacts (-69.0/contact) +
2D Compatibility (PS) -20547 + (NN) -11968 + (LL) 5068
1D Compatibility (HY) -16400 + (ID) 3950
Total energy: -151925.0 ( -100.61 by residue)
QMean score : 0.548
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