Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MQLNLFNNNQVDYSRQNYIILDENKHIYNAVI--NDLSWKYLFLFGPKGSGKTHLAHIWQSINNAIFINV------------------NNFISEIRYS--NAFILEDVQDI---------QDEATLLHCYNYMKE---NNKRLLITSSTSPKRLNFKLKDLSSRILSTISAKIPSASEELLRIMLIKR-FSDKQLKVDLKVINYILARIERSFCSINRIIEKIDNGSMGSNVTIPFVSTLLKRDTT--- |
1D2N Chain:A ((25-270)) | EDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTS-RKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKG--KKVWIGIKKLLMLIEMSLQMD-PEYRVRKFLALLREEGASPLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84886 for 1576 contacts (-53.9/contact) +
2D Compatibility (PS) -22236 + (NN) -8960 + (LL) 448
1D Compatibility (HY) -7600 + (ID) 1800
Total energy: -125034.0 ( -79.34 by residue)
QMean score : 0.408
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