Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKEKYSFKEVENKYNILWEDSRVYKWDG---KKENTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLGKDIFYPIGFDDNGLPTERLVEQTYKTRAREVGREKFIEMCHEVIEKSKQEFKELLRSVGISYDWSLEYHTISKETVTLSQMSFIDLYNKGYAYRKMQPILWDPVDKTAIAQAEIEDKVCESSLNTITFSTEE-------NEQIDIATTRPELFLACVAVFCHPEDAR--------------------------------------YAHLIGKTSVVPIIGVKVPIIADGRVKIDKGTGLVMCCTFGDELDIYWQQKHNLPMKIIIDQDGKINLDSMYDNNRSQYQGIGMTGERSTGVIKEGAISPHYDVIPVRNTRIYDEINGLKVKEARKKIIKILTERGLLTGSTNISHSVKCAERSGVSLEILPTYQWFIKTLDQKAQVLDKVKECNWYPSTMRKRMEVWIEGLNWDWCISRQRYFGVPFPVWYSRRKGEEGKV----I--L-------AEVEDLPVDPLKDLP-----KGYSKEEVVPDQDVMDTWATSAITPQLSALAVNSEFSLPDHRYNTIFPADLRSQSHEIIRTWAFYTILKAYYHANSLPWKNIMVSGWCLADDKKKMSKSKGNIITPKSILDTYGADVVRYWTANSRLGVDTVYSENILKIGKRLVTKLWNASKFVSIFMERYQAVS---INSVSETMDQWILSKLYKVIEKATNNLLQFEYCEALGAVEGFFWKDFCDNYLELAKKRAYGDKVSSKANLSAKQSLTYVLNTILRLLAPFLPYITEQIYHQLYS--DNSVHNRGNWPNKEELIYDKHSEEMGDKF----MQILNLVRKIKADNNVSVKHLIKKLMIKANVKED--KLNQSAQNDLQTVCNAEMIEWSENAQAGLITENGKFIVSIDLY |
| 1FFY Chain:A ((14-864)) | -FPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGV-DRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFNVKDDKGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAEALDWDKASIKLEKEYTGKELEWVVAQHPFLDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQQYELPVISPIDDKGVFTEE-------------------------------------------GGQFEGMFYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRD-RGEWVISRQRVWGVPLPVFYAENGE--IIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSGSSHRGVLE-------T---RPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDDYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKEESVH-LADMPKVVEV--DQALLDKWRTFMNLRDDVNRALETARNEKVIGKSLEAK-VTIASNDKFNASEFL-TSFDALHQLFIVSQVKVVDKLDDQATAYEHGDIVIEHAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FFY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -321292 for 6313 contacts (-50.9/contact) +
2D Compatibility (PS) -81434 + (NN) -16928 + (LL) 3208
1D Compatibility (HY) -22000 + (ID) 9350
Total energy: -447796.0 ( -70.93 by residue)
QMean score : 0.365
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