Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMG-TTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLK--DTKIVGQEPAPNLEEISKLKPDLIVASKVRNE---KVYDQLSKIAPTVSTDTVFK-FKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYA---GGYAGEILNDLGFKR---NKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQSK----- |
| 3R5T Chain:A ((3-298)) | ---------------------------------NVWPRTFQNADGSITTIPSQPKRILSTAVTVTGTLLAIDAPVIASAA-TTQSTFFEQWRKLAELRQVKKLWPAGSVDLESVYVEQPDLIVVSMIGADSARDQIPLLQAIAPTILVDYSDQTWQSLAQQLGLATGLEEQAERTIHNFEQWTKQVRDVLDLP-----KGRANIVSYHGPGVVNAVAKAQSAHAQLLQSVGVVLEEPDPAWQAGSIVHRDFLRI-HYEHLTQLQAETTFLITMT---------DQQAQAFLHDPILKNLPSIQRKQVYG-LGENSFRI--DLFSAREIINSLLRRFAGEQAQSLVMPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32373 for 2267 contacts (-14.3/contact) +
2D Compatibility (PS) -29772 + (NN) -10699 + (LL) 3188
1D Compatibility (HY) -10800 + (ID) 2650
Total energy: -83106.0 ( -36.66 by residue)
QMean score : 0.493
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