Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKNILITGVHGYIGNALKDKLIEQGHQVDQINVRNQ--------------------------LWKSTSF--KDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQLAQKAKAED-VKQFIFMSTMAVYGKEGQVG------------KSDQIDTQTPMNPTTNYGISKKFAEQALQELISD-SFKVAIVRPPMIYGAHCPGN-----FQRLMQLSK--------RLPIIPNINNQRSALYIKHLTAFIDQLISLE---VTGVYHPQDS--FYFDTSSVMYEIRRQSHRKTVLINMPSVLNKYFNKLSVFRKLFGNLTYSNTLYENNNALEVIPGKMS-LVIADIMDETTTKDKA |
| 1ORR Chain:A ((2-339)) | --AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVR-------------ESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ORR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99868 for 2382 contacts (-41.9/contact) +
2D Compatibility (PS) -29523 + (NN) -6555 + (LL) 1444
1D Compatibility (HY) -6000 + (ID) 2350
Total energy: -142852.0 ( -59.97 by residue)
QMean score : 0.434
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