Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQAVKVERRETLKQKPNTSQLGFGKYFTD--YMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYK-RDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPE-GEGQSLYIRPFVFATEGALGVGASHQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFV--ENGKVITPELNGSILPGITRKSIIELAKN-LGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRY-EDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPKY |
| 3UYY Chain:B ((27-358)) | -------------------STLGFSYIRTDLRYLAHWK---DGEWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYFKG-GLTPTN-FITSDYDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPATHTTIEEAGAANFFAITQDGQKFVTPQ-SPSILPSITKYSLLWLAEHRLGLEVEEGDIRIDEL------GKFSEAGACGTAAVITPIGGIQHGDDFHVFYSESEPGPVTRRLYDELVGIQYGDKEAPEGWIVKV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130367 for 2686 contacts (-48.5/contact) +
2D Compatibility (PS) -34923 + (NN) -7138 + (LL) 2556
1D Compatibility (HY) -27600 + (ID) 6500
Total energy: -203972.0 ( -75.94 by residue)
QMean score : 0.480
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