Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKLMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIVIHQTLKRWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYT-EHPDHRFFATGDPTHITNIIKEWLNLSVNVERISVND
2OHO Chain:A ((11-273))
DTRPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKMIVFACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQLLAPSIQVRSLACPKFVPIVES-----SIA-KKIVYDSLAPLV-GKIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVEHRFFTTANPEIFQEIASIWLKQKINVEHVTL--
General information:
TITO was launched using:
RESULT:
Template:
2OHO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -233556 for 2256 contacts (-103.5/contact) +
2D Compatibility (PS) -27956 + (NN) -9035 + (LL) 112
1D Compatibility (HY) -27200 + (ID) 5700
Total energy: -303335.0 ( -134.46 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_2OHO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OHO-query.scw
PDB file :
Tito_Scwrl_2OHO.pdb
: