Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNHLLSMEHLSTDQIYKLIQKASQFKSGERQLPNFEGKYVANLFFENSTRTKCSFEMAELKLGLKTISFETS--TSSVSKGESLYDTCKTLESIGCDLLVIRHPFNNYYEKLA---NINIPIANAGDGSGQHPTQSLLDLMTIYEEYGYFEGLNVLICGDIKNSRVARSNYHSLKALGAN-VMFNSPNA-----WIDDSLE------APYVNIDDVIETVDIVMLLRIQHERHGLAEETRFAADDYHQKHGLNEVRYNKLQEHAIVMHPAPVNRGVEIQSDLVEASKSRIFKQMENGVYLRMAVIDELLK |
2HSE Chain:C ((8-304)) | --HIISINDLSRDDLNLVLATAAKLKANP-QPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVI-STYVDAIVMRHP-QEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLAPSEYANVKAQFVLRASDLHNAKANM-----KVLHPLP--RVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HSE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113740 for 2367 contacts (-48.1/contact) +
2D Compatibility (PS) -30093 + (NN) -7969 + (LL) 1228
1D Compatibility (HY) -16800 + (ID) 5200
Total energy: -172574.0 ( -72.91 by residue)
QMean score : 0.348
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