Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGVKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLS--IASGHVGMVGGQMLDMQSE----GQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLL--GKDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH |
| 3OYR Chain:B ((61-289)) | -------------------------------------IAAGGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFELMVETNSMK---ALEILARASRVIAEGEVLQL------MRSHDLNLSQAVYLE----IIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLLAIARSGPREAEFWERAIGRREQTEAD-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24577 for 1732 contacts (-14.2/contact) +
2D Compatibility (PS) -23706 + (NN) -13123 + (LL) 5396
1D Compatibility (HY) -10800 + (ID) 4050
Total energy: -70860.0 ( -40.91 by residue)
QMean score : 0.269
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