Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MTYKELATFLKVLSDSSRLEILDLLSCGELCACDLLAHFQFSQPTLSYHLKALVKTNLVTTRKIGNKHLYQLNHNIFESVINNLSKVHTSNQRCFCHNLKTGEC
1SMT Chain:A ((24-121))
ELQAIAPEVAQSLAEFFAVLADPNRLRLLSLLARSELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRKQGRHVYYQLQD---HHIVALYQNALDHLQEC----------
General information:
TITO was launched using:
RESULT:
Template:
1SMT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61992 for 550 contacts (-112.7/contact) +
2D Compatibility (PS) -9595 + (NN) -3395 + (LL) 688
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -82994.0 ( -150.90 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_1SMT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SMT-query.scw
PDB file :
Tito_Scwrl_1SMT.pdb
: