Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNKQILFNKIP--EGMPQEDTFKIEEIDTPKLESDG-VLVQTLYISVDPYMRGRMTK--ADSYVQPFEIGKPIVSHVVAKVIDSTLADYKKGDVVVGM-LPWRIINHVQADQITKV--PTTDVPLDLYLSVLGMPGQTAYHGLLDIGQPKAGD--TVVVSAASGAVGSVVGQIAKIKGC-RVVGIAGGDKKVNYLTETLGFDAGIDYKKEDFAEALAQAVPDGIDVYFENVGGTVGDEVFKHLNRFARVPVCGAISSYN----HPEADIGPRIQGTLIKKQVMMRGFLVSEFANAFKEASEQLATWVQEGKIQSQVTIEDGFENAPHAFKNLFTGDNFGKQVIKVTE |
| 2ZB8 Chain:A ((10-352)) | ---QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDT----ITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPP-LSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCIS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210632 for 2834 contacts (-74.3/contact) +
2D Compatibility (PS) -35172 + (NN) -13817 + (LL) 408
1D Compatibility (HY) -28800 + (ID) 6250
Total energy: -294263.0 ( -103.83 by residue)
QMean score : 0.519
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