Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MTKKLLTLFIVSMLILTA----------------------CGKKESATTSSKNGK-----------------PLVVI-YGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLDFQKQLFAAQQDENKEW-LTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTTPTAFINGEKVEDPYDYESYEKLLKDKIK----------- |
| 4PWO Chain:A ((1-250)) | TQAEKTATDLPPGFSGKAGSVNATPGTKGLDGPTPLADGSFDATIFGPAKELKSADDILNVHRRNAKDPFAVGAVDAPLVITEFSDFECPFCARWSNQTEPTLMEEYVSKGLVRIEWNDLPVNGEHALAAAKAGRAAAA--QGKFDEFRKALFEASRNVSGHPNNTLKDFERFARNAGV--KDMERFSREAQ--DSTYDEVLAKAADYAHGLGVSGTPAFVVGTQYISGAQPTEEFIKVIESELKKSPTFSTPSSH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -37679 for 1496 contacts (-25.2/contact) +
2D Compatibility (PS) -20512 + (NN) -5023 + (LL) 340
1D Compatibility (HY) -4000 + (ID) 1750
Total energy: -68624.0 ( -45.87 by residue)
QMean score : 0.466
|
|
|