Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLENKVAVVTGASTGIGQASAIALAQEGAYVLAV-----DIAEAVSETVDKIKSNGDNAKAYNVDISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILMTKMMLPLMMNQGGSIVNTSSFSG----QAEDLYRSGYNAAKGAVINFTKSIAIEYGRDGIRSNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGVMAYTWPGEMLSDDSWKRTLE |
4I5E Chain:G ((16-259)) | --RLLNKTAVITGGNSGIGLATAKRFVAEGAYVFIVGRRRKELEQAAAEI-------GRNVTAVKADVTKLEDLDRLYAIVREQRGSIDVLFANSGAIEQK-TLEEITPEHYDRTFDVNVRGLIFTVQKALPLLRD-GGSVILTSSVAGVLGLQAHDTY----SAAKAAVRSLARTWTTELKGRSIRVNAVSPGAIDTPIIENQVSTQEE--ADELRAKFAAATPLGRVGRPEELAAAVLFLASDDSSYVAGIELFVDGGL-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93478 for 1990 contacts (-47.0/contact) +
2D Compatibility (PS) -25264 + (NN) -7306 + (LL) 1892
1D Compatibility (HY) -14400 + (ID) 4850
Total energy: -143406.0 ( -72.06 by residue)
QMean score : 0.472
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