Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIGFGGNKDKREYFENATAQIGAKLLVCDIREQFFNDVLF-KPKYGYGKYFNPCIDCHANMFRNAFYKMLELDADFVLSGEVLGQRPKSQRKEALNQVRKLVREVGEEARFDLILDRTQASGEKPQFLDELLLRPMSAKLLEPTFMEKKGWVDREKLLDVSGRGRARQLQMIKDYGLKYYEKPGGGCLLTDIQVSNKIKNLKEYREMVFEDGVIVKNGRYFVLPHNARLVVARNEEENHKLDIEHPLMDKIELLGCKGPLSLVDKNASQEDKELAGRIALGYAKTLKNQAYLIQIGNEKRELYPLDKENAREYLFA |
2O8V Chain:A ((45-203)) | --PGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFP-ETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQ-GVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQS--GSR-ANLPVLAIQR--------------------------GVFKVLPIIDW------------------------DNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKLKRECGLHEG------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45343 for 1128 contacts (-40.2/contact) +
2D Compatibility (PS) -16675 + (NN) -1900 + (LL) 10484
1D Compatibility (HY) 0 + (ID) 1150
Total energy: -54584.0 ( -48.39 by residue)
QMean score : 0.360
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