Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIQIHHANAFEIIKDFHQQNLKVDAIITDPPYNISVKNNFSTLKSAKRQGIDFGEWDKNFKLLEWIARYASLINPNGCMVIFCSYRF-ISYIADFLEENGFVVKDFIQWVKNNPMPRNIHRRYVQDTEFALWAVKKKAKWVFNKPKNEKYLRPLILKSPVVSGIERVKHPTQKSLTLMEKIISTHTNPNDTVLDPFMGSGTTGLACKNLKRNFIGIESEKEYFQIAQKRLS------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
4ZCF Chain:A ((13-644)) | ANSKQLAVLKANFPQCFDKNGAFIQEKLLEIIRASEKESYSLNWLGKSYARLLANLPPKTLLAEDKTHNQQEENKNSQHLLIKGDNLEVLKHMVNAYAEKVKMIYIDPPYNTGKDGFVYNDDRFTPEQLSELAGIDLDEAKRILEFTTKGSSSHSAWLTFIYPRLYIARELMREDGTIFISIDHNEFSQLKLVCDEIFGEQNHVGDLVWKNATDNNPSNIAVEHEYIIVYTKNKEQLISEWKSNISDVKNLLVNIGEEFASKYTGNELQEKYTQWFREHRSE-LWPLDRYKYIDKDGIYTGSQSVHNPGKEGYRYDIIHPKTKKP------------------CKQPLMGYRFPLDTMDRLLSEEKIIFGD-------DENKIIELKVYAKDYKQKLSSVIH-----LDGRVATNELKELFPMT---------QPFNAKTIKLVEDLISFACDGEGIVLDFFAGSGTTAHTVFNLNNKN---KTSYQFITVQLDEPTKKSDAMKHGYNTIFDLTKERLIRASKKNRDQGFKVYQLMPDFRAKDESELTFFDDVVLTPEQYDTLLTTWCLYDGSLLTTPIEDVDLGGYKAHLCDGRLYLIAPNFTSEALKALLQKVDSDKDFAPNKVVFYGSNFSAKQMELNEALKSYANSIELDLVVRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4892 for 1135 contacts (-4.3/contact) +
2D Compatibility (PS) -19487 + (NN) -4451 + (LL) 3704
1D Compatibility (HY) -4800 + (ID) 1850
Total energy: -31776.0 ( -28.00 by residue)
QMean score : 0.253
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