Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKENLPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLISTIQNALNNLTTPIDVLTITANGEPTL-----YPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLD-AIDLKAFERVDKPYSKDINKILEGILSFSQIYQGQLVAEVLLIKGVNDSANNLKLIADFLKKINTARVDLSTID---------RPSSFKAPKLSE------DELLKCS--------LFFEGLCVSLPKRSTAQAKKLVSCGIDELLA----LISRRPLSAEEAPL-ILDPNAFKHLETLLNHKQITIKKVGSLEFYCAF---------------------------------------------------------------- |
| 4K36 Chain:A ((2-392)) | -------------------PPLSLLIKPASSGCNLKCTYCFYHSLSDNVKSYGIMRDEVLESMVKRVLNEANGHCSFAF--QGGEPTLAGLEFFEKLMELQRKHNYKNLKIYNSLQTNGTLIDESWAKFLSENKFLVGLSMDGPKEIHNLNRKDCCGLDTFSKVERAAELFKKYKVEFNILCVV----TSNTARHVNKVYKYFKEKDFKFLQFINCLDPLYEEKGKYNYSLKPKDYTKFLKNLFDFWYEDFLNGNRVSIRYFDGLLETILLGKSSSCGMNGTCTCQFVVESDGSVYPCDFYVLDKWRLGNIQDMTMKELFETNKNHEFIKLSFKVHEECKKCKWFRLCKGGCRRCRDSKEDSALELNYYCQSYKEFFEYAFPRLINVANNIVDKLAAALEHHHHHH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4K36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -43093 for 2143 contacts (-20.1/contact) +
2D Compatibility (PS) -29350 + (NN) -12829 + (LL) 1720
1D Compatibility (HY) -11600 + (ID) 2250
Total energy: -97402.0 ( -45.45 by residue)
QMean score : 0.240
|
|
|