Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSNQYIQQRIHKANSLREEGKNPYKNGLKRSLTNAAFLEKYAYVKGLEEPKDKEKCESVVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFATKTGELSIHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM--------HPIPGGANARPFITYHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLD-------SKIIYNDMEVDFNQTSVISYLDALETIGGISKGILEKEDR--LLAYLLEQGIKVEPNLTHGKLLAEAFDHFVEHKLINPTFVTEYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHEMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMRPVKNDFNVEGEE |
| 3G1Z Chain:B ((19-325)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFETR---FVGP---QGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHY---DMYRLMNEVDDLLQQVLDCQPAESLSYQQAFQRHLEIDPLSADKTQLREAAAKLD-L------EEDRDTLLQLLFTMG--VEPHIGKEK----------------PTFIYHFPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRK---RGLPQQPIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G1Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109713 for 2097 contacts (-52.3/contact) +
2D Compatibility (PS) -29550 + (NN) -10250 + (LL) 15900
1D Compatibility (HY) -20800 + (ID) 5300
Total energy: -159713.0 ( -76.16 by residue)
QMean score : 0.391
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