Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLRIQSKEVS-HNLKELSKTLISYPFEKHVEALGEQCSNFVSIPINNDDYSNICTFVSDFINLIASYNLLESFLDFYKDKLKLSELVT-EYANVTNNLLFKKLIKHLSGNNQLVKNFYQCIREIIKYNAPN-KEYKPNQFFIIGKGKQKQLAKIYSHLKELSASEIKPQDMEDILKKLEELDKIFKTTDFTKFTPKTEIKDIIKEIDEKYPINENFKRQFN-EFESNIEKHDEIKKDFERNKESLIREIENHCKNECNSEEEPEYKINDLLKNIQQICKNYIESHAVNDVSKDIKSMMCQFY-LKQIDLLVNS-EIVRYRYSNLFEPIQRSLWESIKILDNESGIYLFPKNIGEIKDKFEANKEKFKQSKNV-SEFAEYCRECNPYTAFNFHLNINNGLS----HQFEKFV-PIMKEYKEPKITDNDLEAISTKETGLASQLSGHWFFQLSLFNKTNFNPNKIWIPLEFNKRSKIKFDKDLEIYFDSHESFNISKKYLQEIDQESLKKIKQSKDFFSIQKIESKHDNNDILQLEFFENDTSFLFAKGSFAEILEYNMQLKIDSLITKEFNKLLAIVQDSPQDSYQLKIRVRHNNKLPREKYTEHEIKLEVYDCRKSHDHNEPIILSQQSTGF-QWAFNFMFGFLYNVGS-HFSFN-HNIIYVMDEPATHLSVPARKEFRKFLKEYAHKNHVTFVLATHDPFLVDTDHLDEIRIVEKETEGSVIKNHFNYPLNNASKDSDALDKIKRSLGVGQHVFHNPQKHRIIFVEGITDYCYLSAFKLYLRYKEYKDNPIPFTFLPISGLKNDSNDMKETIEKLCELDNHPIVLTDDDRKCVFNQQATSERFKRA-NEEMHDPITILQLSDCDRHFKQIEDCFSANDRNKYAKNKQMELSMAFKTRLLYGGEDAIEKQTKRNFLKLFKWIAWATNLIKN |
| 2Y3U Chain:A ((15-695)) | ---NLYFQGGTMYDFEYLNGL----SYTELTNLIK---------NIKWNQINGLFNYSTGSQKFFGDKNRVQAIINALQESGRTYTANDMKGIETFTEVLRAGF--YLGYYNDGLSYLND--RNFQDKCIPAMIAIQKNPNFKLGTAVQDEVITSLGKL--IGNASANAEVVNNCVPVLKQFRENLNQY-APDYVKGTAVNELIKGIEFDFSGAAYEKDVKTMPWYGKI--------------DPFINELKALGLYG-NITSATEWASDVGIYYLSKFGLYS------TNRNDIVQSLEKAVDMYKYGKIAFVAMERITWDYDG---IGSNGKKVDHDKFLDDAEKHYLP-----KTYTFDNGTFIIRAGDKVSEEKIKRLYWASREVKSQFHRVVGNDKALEVGNADDVLTMKIFNSPEEYK-FNTNINGVSTDNGGLYIEPRGTFYTY---------------------ERTPQQSIFSLEELFRHEYTHYLQARYL-------VDGLWGQGPFYEKNR------------LTWFDEGTAEFFAGST------------------------------------------RTSGVLPR-----KLILGYLAKDKVDHRYSLKKTLNSDDSDWMFYNYGFAVAHYLYEKDMPTFIKMNKAILNTD----------VKSYDEIIKKLSDDANKNTEYQNHIQELVDKYQGAGIPLVSDDYLKD----------HGYKKASEVYSEISKAASLTNTSVTAEKSQ------------YFNTFTLRGTYTGETS-------------KGEFKDWD------------------------------------EMSKKLDGTLESLA----KNSWSGYKTLTAYFTNYRVTSDNKVQYDVVFHGVLTDNG---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14099 for 5362 contacts (2.6/contact) +
2D Compatibility (PS) -68233 + (NN) -5493 + (LL) 18896
1D Compatibility (HY) -18400 + (ID) 4300
Total energy: -63431.0 ( -11.83 by residue)
QMean score : 0.182
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