Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQEIENLHQSVLLQEVLQAFTPLEEGI---LIDCTLGLGGHSKAILS----QKPHLKLIGIDK---------DKFAQEIAKERLKEFEGRYN-------------------LLSGGFAKRFKEALEIHGERIKGVLVDLGVSSLQLDDDNRGFNFRSHALDMRMDLESELNAQKVINSYPVVALEKIFRDYGE--IKEYKKIAHKIAERRAKKPFKDAKDLSEFLSSLSKNKKIHPATLVFQAVRIEVNSELEELKEFLQCAR--------NLKEAILCVISFHSLEDALVKNAFKDYAKNCICDPSSFKCACSNNHALGAILTKKPITPSPEEIKNNRRSRSAKMRVFQFKP |
| 4B46 Chain:A ((1-367)) | MK-LAMIGFGQAGGKVVDKFVEYDRERNAGIVRAAVAVNSAKADLLGLKNIPKDQRVLIGQSRVKGHGVGADNELGAEIAEEDIDEVQGAIDSIPVHEVDAFLVVSGLGGGTGSGGAPVLAKHLKRIYTEPVYGLGILPG--------SDEGGIYTLNAARSFQTFVREVDNLLVFD-------NDAWRKTGESVQGGYDEINEEIVNRFGV-LFGSVVDSSEIINTLAGGG----VSTVGYASEGVTAHTTNRITSLVRKAALGRLTLPCEIEGAERALLVLAGPPEHLNRKGIERGRKWIEEQTGSMEVRGGDYPIPGAEKVAGVILLS--GVTNVPRIKELQQVAIEAQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12922 for 2363 contacts (-5.5/contact) +
2D Compatibility (PS) -30920 + (NN) -7674 + (LL) 1388
1D Compatibility (HY) -3600 + (ID) 2550
Total energy: -56278.0 ( -23.82 by residue)
QMean score : 0.305
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