Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------MLVDSFNRVIDYI------RVSVTKQC-NF-RCQYCMPTTPLDFFDDEE-L-LPLDNVLEFLKIAIDEGVKKIRITGGEPLL--RKGLDEFIAKLHAYNKEVALVLSTNGFSLKKMAKGLKDAGLSRVNVSLDS-LKSDRVLKIS-----QKDALKNTLEGIEESLKVGLKLKLNTVVMKGVNDD-EI-LELLEYAKNRSIQIRYIEFMENTHAKSLVKGLKEKEILDLIAQ-KYKIMGMEKPKQGSSKIYTLENGYQFGIIAPHSDDFCQS-CNRIRLASDGKICPCLYYQDAIDAKEAIINKDTKMMKRLLKQSIINKPEKNMWNDKNG-GTPTRAFYYTGG |
| 2A5H Chain:A ((3-411)) | NRRYELFKDVSDADWNDWRWQVRNRIETVEELKKYIPLTKEEEEGVAQCVKSLRMAITPYYLSLIDPNDPNDPVRKQAIPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQ-SDDSMPMERIDKAIDYIRN--TPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRIGSRTPVV----------LPQRITPELVNMLKKYHPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQSVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFR-TPVSKGIEIIEGLRGHTSGYCVP--------------TFVVDAPGGGGKTPVMPNYVISQSHDKVILRNFEGVITTYSEPINYTPGCNCDVCTGKKKVHKVGVAGLLNGEGMALEPVGLERNK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65278 for 1996 contacts (-32.7/contact) +
2D Compatibility (PS) -30231 + (NN) -3926 + (LL) 1304
1D Compatibility (HY) -3200 + (ID) 2250
Total energy: -103581.0 ( -51.89 by residue)
QMean score : 0.308
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