Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQTINLTQRYATKKLFENVNIKLDKNK-RYGLIGANGAGKSTFLKILSKSIDCSSGEVIITSGMRMGVLGQDQYAFEDLSLKDAVLIGNRRLYDAIKEKERLYTEGDLSDDKVNARLGELETICVEEDPMYECEVVIEKILEDLGIPSSKHNDLMKTLPSSDKFKILLAQVLFPKPDILLLDEPTNNLDLNAIEWLENNLKRHEG---TMVVISHDRHFLNAVCTHILDLDFHSVREFSGNYDDWYIASTLIAKQQEAERNKKLKEKEELEKFIARFSANASKAKQATSRQKQLDKLDIQSLAISSRRDPSIIFKPKRTIGNEALECENISKSYDDQIVLNQVSLKVMPKDKIALIGPNGVGKSTLCK-ILVEELKPDTGVVKWGATVLKGYFPQNVSEEISGEETLYQWLFN-FNKKIESAEVRNALGRMLFNGEEQEKCVNALSGGEKHRMVLSKLMLEGGNFLVLDEPTNHLDLEAIIALGEALFKF-DG---ALICVSHD----RELID-----AYANRIIELVPSP-K-GAS-IIDFKGSYEEYLASKK--------------------------- |
| 1YQT Chain:A ((24-538)) | ---EEDCVHRYGVNAF-VLYRLPVVKEGMVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVIRAFRGNE--------------LQNYFEKLKNGEIRPVVKPQYVDLIPKAVKGKVIELLKKADETGK----LEEVVKALELENVL-EREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVY-------GEPGVYGIFSQPKGTRNGINEFLRGYLKDENVRFRPYEIKFTKTGERVEIER-------------------------------ETLVTYPRLVKDYGSFRLEV-EPGEIKKGEVIGIVGPNGIGKTTFVKMLA-GVEEPTEGKIEWDLT----VAYKPQYIKADYEGTVYELLSKIDASKLNSNFYKTELLKPLGIIDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLMVFEGEPGKYGRALPPMGMREGMNRFLASIGITFRRDPDTGRPRANKEGSVKDREQKEKGEYYYIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68326 for 3788 contacts (-18.0/contact) +
2D Compatibility (PS) -49778 + (NN) -20833 + (LL) 5896
1D Compatibility (HY) -15600 + (ID) 4200
Total energy: -152841.0 ( -40.35 by residue)
QMean score : 0.273
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