Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVHQSEMENYNIGQASIEEVSDPAY---KGAKIVVVGVGGGGSNMIKHLVEYGVHQDVTPIATNTDGQHLKNNPAPVKILLGKESTGGLGAGGVPDIGKKAAEESADEIREAIKDAKLVIVSTGLGGGTGTGATPTIVKIAKEVGALTIAIVTKPFKYEGNQKRKRAEEGLKELEQSSDSILVIPNDKILLTMKKNASTTECYREVDDVLVRAVSGISTIITKPGNINVDFADLKSALGFKGFALMGIGEATGEDSAKLAVQNAIQSPLLDDASIEGAKSIIVFFEHHPDYPMMAYSQACDFIQDQAHQDVDVKFGQHTSENIPIDHVRVTIIATGSERNSNGAGLESIATPSQPVVKPTRKVGNGEYLRIPTEEELSIPTTIRIQQD |
| 1W5E Chain:H ((23-341)) | ---------------SPEDKELLEYLQQTKAKITVVGCGGAGNNTITRLKMEGIEGAKT-VAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAEEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEK-LFEIVPNMPLKLAFKVADEVLINAVKGLVELITKDGLINVDFADVKAVMNNGGLAMIGIGESDSEKRAKEAVSMALNSPLLD-VDIDGATGALIHVMGPEDLTLEEAREVVATVSSRLDPNATIIYGATIDENLE-NTVRVLLVITGVQSRIEFTDTGLKRKK------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163633 for 2875 contacts (-56.9/contact) +
2D Compatibility (PS) -35241 + (NN) -20056 + (LL) 2532
1D Compatibility (HY) -22400 + (ID) 6750
Total energy: -245548.0 ( -85.41 by residue)
QMean score : 0.587
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