Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEIKTLLVDFFPQAKHFGIILIKAIVVF-CIGFYFSFFLRNKTMKLLSKKDEILANFVAQVTFILILIITTIIALSTLGVQTTSIITVLGTVGIAVALALKDYLSSIAGGIILIILHPFKKGDIIEISGLEGKVEALNFFNTSLRLHDGRLAVLPNRSVANSNIINSNNTACRRIEWVCGVGYGSDIELVHKTIKDVIDGMEKIDKNMPTFIGITDFGQSSLNFTIRVWAKI------EDGIFNVRSELIERIKNA----------LDANRIEIP-----FNKLDISINKQDSSK- |
| 4P4M Chain:A ((92-378)) | --KPKLKAIQELTQVHGFGPRAAAALFDREGIFTVDELLQKADSIPSLTDQQRVGIKYFYDINE-KIPMQESVLHENYLREKCMEVLGKDFSILICGSYRRRHPFS---GDVDAILSRTLDAPPLSEPVAATGVLGHFVEFLESLKYLEATMAQGPLKYMGMGRLPPRINTKVYK-------ARRVDIRLI--------------ETKSVPTAMLTFTGSKNFNVIMRQAAISKGYLLNEYGLFKLGTPEEARGKNAGEELGVPKDELEDKRVEVRSEQDVFDVLGMPYAKPENRDP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110549 for 1708 contacts (-64.7/contact) +
2D Compatibility (PS) -24842 + (NN) 4354 + (LL) 2468
1D Compatibility (HY) -3600 + (ID) 2150
Total energy: -134319.0 ( -78.64 by residue)
QMean score : 0.212
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