Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKCEKRVFDSLPSTQTYLLEKLKSNKLKAPVLVLAKNQSAGIGSRGNIWEIVESALTFSLALNASDLPKDLPMQASALYLGFLFKEVLKELG-SQTWLKWPNDLYLGD----QKIGGVMVNVYKGMRVCGIGVNRVST-------KWACLDI----GASDDWIIESFLKKIEENL-FWG-------EVLSKYAL-EFHRSNSFNFHNDWGEAVSLKDAELLEDGRICIKGKIYDRM
2EJ9 Chain:A ((1-224))
---MEIIHLSEIDSTNDYAKELAKE--GKRNFIVLADKQNNGKGRWGRVWYSDEGGLYFSMVLDSKL-Y---NPKVINLLVPICIIEVLKNYVDKELGLKFPNDIMVKVNDNYKKLGGILTELTDDYMIIGIGINVNNQIRNEIREIAISLKEITGKELDKVEILSNFLKTFESYLEKLKNKEIDDYEILKKYKKYSITIGKQVKILLSNNEIITGKVYDIDFDGIVLGTEKGIERI
General information:
TITO was launched using:
RESULT:
Template:
2EJ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101356 for 1500 contacts (-67.6/contact) +
2D Compatibility (PS) -21363 + (NN) -8994 + (LL) 660
1D Compatibility (HY) -12400 + (ID) 2650
Total energy: -146103.0 ( -97.40 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_2EJ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EJ9-query.scw
PDB file :
Tito_Scwrl_2EJ9.pdb
: