Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAISIKSPKEIKALRKAGELTAQALALLEREVRPGVSLLELDKMAEDFI-KSSHARPAFKGLYGFPNSVCMSLNEVVIHGIPTDY-VLQEGDIIGLDLGVEVDGYYGDSALTLPIGAISPQDEKLLACSKESLMHAISSIRVGMHFKELSQILEGAITERGFVPLKGFCGHGIGKKPHEEPEIPNYLEKGVKANSGPKIKEGMVFCLEPMVCQKQGEPKILADKWSVVSVDGLNTSHHEHTIAIVGNKAVILTER |
| 2GU6 Chain:B ((3-250)) | ---SIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSR----ETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GU6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -119072 for 2151 contacts (-55.4/contact) +
2D Compatibility (PS) -27049 + (NN) -9637 + (LL) 784
1D Compatibility (HY) -18000 + (ID) 4750
Total energy: -177724.0 ( -82.62 by residue)
QMean score : 0.582
|
|
|