Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSSNDLFMVVLGAILLVLVCLVGYLYLKEKEFYHKMRRLEKTLDESYQENYLYSKRLRELEGRLEGLSLEKSAKEDSSLKTTLSHLYNQLQEIQKSMDKERDYLEEKIITLENK------FKDMGHYAASDEVNEKQVLKMYQEGYSVDSISKEFKVSKGEVEFILNMAGLKW- |
2LVS Chain:A ((1-105)) | ----------------------------------------------------------------------MPSVNDSLDIVEKLYKDGVPVKEIAKRSNNSMSTVYKALEKLEAMGRIKRRKGRYRQHRRLTEEELATIRELYLKGATVYEIARQLGRPESTIYYALKKLGLKLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5191 for 583 contacts (8.9/contact) +
2D Compatibility (PS) -9988 + (NN) -700 + (LL) 6524
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -2173.0 ( -3.73 by residue)
QMean score : 0.531
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