Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFEKIRKILADIEDSQNEIEMLLKLANLSLGDFIEIKRGSMDMPKGVNEAFFTQLSEEVERLKELINALNKIKKGLLVF-
4AJ5 Chain:A ((3-81))
-SSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDY
General information:
TITO was launched using:
RESULT:
Template:
4AJ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2158 for 324 contacts (6.7/contact) +
2D Compatibility (PS) -8631 + (NN) -5156 + (LL) 208
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -13921.0 ( -42.97 by residue)
QMean score : 0.260
(partial model without unconserved sides chains):
PDB file :
Tito_4AJ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AJ5-query.scw
PDB file :
Tito_Scwrl_4AJ5.pdb
: