Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVTRFKKAFISYSLGVLVVSLLLNVCNASAQEVKVKDYFGEQTIKLPVSKIAYIGSYVEVPAMLNVWDRVVGVSDYAFKDDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLVVTF--VGNPKAVEHAKKFGISFL---SFQETTIAEAMQAMQAQATVL--EIDASKKFAKMQETLDFIAERLKGVKKKKGVELFHKANK---ISGHQAISSDILEKGGIDN-FGLKYVKFGRADISVEKIVKENPEIIFIW--WVSPLTPEDVLNNPKFSTIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEIEPFLWH |
| 1N2Z Chain:A ((1-245)) | -----AAPRVITLSPANTELAFAAGI-------------------------------------------TPVGVSS--YSD----YPPQAQKIEQVSTWQG-----MNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDAT---SIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGI--NPPFTSGKESIQNQVLEVCGGENIFKDSRV--PWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWG----EQL----KIPVIPLTSDWFERA---SPRIILAAQQLCNALSQVD-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121592 for 1843 contacts (-66.0/contact) +
2D Compatibility (PS) -25467 + (NN) -9330 + (LL) 8392
1D Compatibility (HY) -9600 + (ID) 2250
Total energy: -159847.0 ( -86.73 by residue)
QMean score : 0.527
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