Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKRMKCFSQKWLVFFVTHWLLLASLSHAKMAFESNIDTKALEAFGVNASFLSQMPGALKKVNKEEEWKKLVKRFDVNYQFIPIIKNMLIGASVPQEFLFLAMAESKFSSRAYSRKKAVGIWQFMPSTAKELGLKVNHYIDERRDPIKSTQAAIAYLKRLYKQTGEWY-LVAMAYNYGLRKVQNAIKAAGTSDIKVLLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGARVSLVGVPFKRHTSLVQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFKQRQLKQNKNAQANPKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIHQRLIIPTNKKLLATREF |
| 1GSZ Chain:C ((463-508)) | ------------------------------------------------------------------------------------------------------------------------------------------------DAWKVIRRAVEYLKREQKPDGSWFGRWGVNYLYGTGAVVSALKAVGIDTREPYIQKALDWVEQHQNPDGGWGEDCRSYEDPAYAGKGASTPSQTAWALMALIAGGRAESEAARRGVQYLVETQRPDGGWDEPYYTGTGFPGDFYLGYTMYRHVFPTLALGRYKQAI----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GSZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12653 for 228 contacts (-55.5/contact) +
2D Compatibility (PS) -4692 + (NN) -822 + (LL) 16932
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -5335.0 ( -23.40 by residue)
QMean score : 0.423
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