Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MYKKLATVGMTVLLVGALS----ACSFNDD----KDTSSNNSNNETTSSKSSNNESSSDSLQNKSLDMSYEDAINAFKDKHSD---------------AEISSVELEKSLGKY--------VYKVDGISNDNEYEMKFNAETKEQLSDETDRLDREDAGGVEKENEKLSLDGIKSPKEAMDKAVSEQAGDVTSWKIE----------RELDTTYYE----------------------VTVKQDNNKYEIKLNAKTLEILQTEQDD |
| 4XGC Chain:B ((62-352)) | EGSINAIMEEYRSYFPKWMCILNEGFNILLYGLGSKHQLLQSFHREVLHKQTVLVVNGFFPSLTIKDMLDSITSDILDAGISPANPHEAVDMIEEEFALIPETHLFLIVHNLDGAMLRNVKAQAILSRLARIPNIHLLASIDHINTPLLWDQGKLCSFNFSWWDCTTMLPYTNETAFENSLLVLALSSMRSVFSSLTTNSRGIYMLIVKYQLKNKGNATGMPFRDLYSSCREAFLVSSDLALRAQLTEFLDHKLVKSKRSSEQLTIPIDGALLQQFLEEQE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 52729 for 1225 contacts (43.0/contact) +
2D Compatibility (PS) -21528 + (NN) -2897 + (LL) -76
1D Compatibility (HY) -8800 + (ID) 1700
Total energy: 17728.0 ( 14.47 by residue)
QMean score : 0.224
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