Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEALVEMPMGILLYDEH-YKIEWVNPFMSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLYDRTEYYDLNKKFQANKSVFAVIFLD----NYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKRLEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDLIQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKRTRVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIKNIVTPQVALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGSPVLVYIEPYASSTAELITELFEYQPDLEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSLGADTILVQQFLKEDITTFTQRSRLVESLEIYHDGMAIATGHEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPDKLIGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAEAEKQLISAIDAYWKGET |
1CWY Chain:A ((1-500)) | -----------------------------------MELPRAFGLLLHPTSLPGPYGVG-VLGREARDFLRFLKEAGGRYWQVLPLGPTGYGDSPYQSFSAFAGNPYLIDLRPLAERGYVRLEDPGFPQGRVDYGLLYAWKWPALKEAFRGFKEKASPEEREAFAAFREREAWWLEDYALFMALKGAHGGLPWNRWPLPLRKREEKALREAKSA-----------LAEEVAFHAFTQWLFFRQWGALKAEAEA-----------LGIRIIGDMPIFVAEDSAEVWAHPEWFHLD--------------EEGRPTVVAGVPPDYFSETGQRWGNPLYRWDVLEREGFSFWIRRLEKALELF-----HLVRIDHFRGFEAYWEIPASCPTA---------------------VEGRWVKAPGEKLFQKIQEVFGEVPVLAE--DLGVITPEVEALRDRFGLPGMKVLQFAFDDGMENPFLPHN---YPAH-------------GRVVVYTGTHDNDTTLGWYRTAT-------------PHEKAFMARYLADWGITFR--------------EEEEVPWALMHLGMKS----------------VARLAVYPVQDVLALGSEARMNYPGRPSGNWAWRLLPGELS-PEHGARLRAMAEATERL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CWY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34762 for 4273 contacts (-8.1/contact) +
2D Compatibility (PS) -52510 + (NN) -12649 + (LL) 15292
1D Compatibility (HY) -800 + (ID) 3200
Total energy: -88629.0 ( -20.74 by residue)
QMean score : 0.216
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