Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKWSFLVVTVLAFVLVLAGCGASNDKVSGDKDKLKVVTTFYPMYDFTKNVAGDNASIEMLIDAGTEPHDYEPSAKDIAKIEAADVFVYNSEDMETWVPSVLKSLDSKKLTVIDASKGIELVEGTEEEDHDHEHEEGHHHEHDPHVWLSPVLAEQEVTNIQNGLTKADKTNADTYKKNAETYKEKLKTLDNKFKTAFEG--AKQRDFVTQHAAFQYLAKEYDLHQVAIAGLSPDQEPSPARLAELQKYVKENNISTIYFEEVASPKVAETLANETGAKLEVLSPIEGIT----DKEQKKGMDYIAYMEQNLQALQKTIK-
1TOA Chain:A ((37-313))--------------------------------GKPLVVTTIGMIADAVKNIAQGDVHLKGLMGPGVDPHLYTATAGDVEWLGNADLILYNGLHLETKMGEVFSKLRGSR-LVVAVSETIP----------VSQRLSLEEAEFDPHVWFDVKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQRKLPAIFIESSIPHKNVEALRDAVQARGHVVQIGGELFSDAMGDAGTSEGTYVGMVTHNIDTIVAALAR


General information:
TITO was launched using:
RESULT:

Template: 1TOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56940 for 2234 contacts (-25.5/contact) +
2D Compatibility (PS) -29052 + (NN) -11848 + (LL) 3256
1D Compatibility (HY) -19600 + (ID) 3250
Total energy: -117434.0 ( -52.57 by residue)
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_1TOA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TOA-query.scw
PDB file : Tito_Scwrl_1TOA.pdb: