Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------LIIDVLQHVPHEGPGLIANWAR----ENQHQLKIHSLFEENAHV--PNDSDFLIVLGGPMGINDTAEFPWLKDERKLIKRLSEQHKPVFGVCLGAQQIAATF-GSEITVNKEKEVGWFPVKRTSDKLLFFPKSLNVFHWHQDTFA-------LPTGSTRLFASEGCLNQAFLY--GENIIGLQFHFEMEKAGIETILRIDEAFITPGKYVQSVEVMREKDVPEDN-----KQMLEAILDYLINPKTI-- |
| 2VDJ Chain:A ((17-296)) | EENIFVMTKERAETQDIRALKIAILNLMPTKQETEAQLLRLIGNTPLQLDVHLLHMESSFYKTFRDIENEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVQKYPLKEKMFGVFEHEVREQHVKLLQGFDELFFAVHSRHTEVRESDIREVKELTLLANSEEAGVHLVIGQEGRQVFALGHSEYSC---DTLKQEYERDRDKGLNIDVPKNYFKHDNPNEKPLVRWRSHGNLLFSNWLNYYVYQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104599 for 1737 contacts (-60.2/contact) +
2D Compatibility (PS) -23911 + (NN) -7359 + (LL) 176
1D Compatibility (HY) -4000 + (ID) 1650
Total energy: -141343.0 ( -81.37 by residue)
QMean score : 0.375
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