Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------MVFPKKLVASIAVFISLGFIYFRVSTAVAFENTSSASLLPSTGDAFSVWPIVIGVVLVALAVVLFIKKKI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4DO7 Chain:A ((3-289)) | ALRIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQARAGRDETAFLLELACDEARIAAVVGWEDLRA----PQLAERVAEWR---GTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFERQLPDVQAFCARHDAHWLVLDHAGKPALAEFDTALARWRAALRELAALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSDWPVCLLAASYDEVASLVERWAESRLSAAERSALWGGTAARCYALP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DO7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50914 for 358 contacts (-142.2/contact) +
2D Compatibility (PS) -6239 + (NN) 3750 + (LL) 1068
1D Compatibility (HY) 400 + (ID) 550
Total energy: -52485.0 ( -146.61 by residue)
QMean score : 0.279
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