Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LEFWRRSVFYEIYMKSFQDSNGDGLGDFKGLTSRLDYLVDLGIDGIWLTPFYPSPQVDNGYDVSDYCDINPDYGDMTDFRAFMKAADARGIKVIIDLVLNHSSTEHTWFKESRSSKTNPKRDYYIWREKPNNWESFFGGSAWEKDELTGEYYYHSFAKEQADLNWANEAVRAEMEQVLAFWLNEGVAGFRLDVINNLTLVLEFPDNPVASGEMEHVYDRNQSGLEQALEDIASFCRKERDVFLVGEISSDKLPEIARYSSKKM---LDVTFNF------------NFGSVDQLDAKSVFTTLNEMETALNEGQ-WPTLFFGSHDMSRFRSRLASGDIVK---TQLLAFLMLTAKGVPFIYYGEEVGMPDLTFSSVKEMRDIQGTAAYYQALQTGTDEKQALEIAIEKTRDKARGPMIFPDGKPF---TLGEPWIKM--------ATLPEEEARMMWDFYQALLAFRKENDF-KEMEYTFLKLDGEVLSYQRGEFIFLLHFGEEEITYPLQGNYQLVFGEAMMVENGIRMGAHTGIALRVEE |
2ZIC Chain:A ((4-480)) | -HWWHKATVYQIYPKSFMDTNGDGIGDLKGITSKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVVNHTSDEHAWFIEAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKKQPDLNWENANLRQKIYDMMNFWIDKGIGGFRMDVID---MIGKIPAQHIVS---------NGPKLHAYLKEMNAASFGQHDLLTVGE-TWGATPEIAKQYSNPVNHELSMVFQFEHIGLQHKPEAPKWDYVKELNVPALKTIFNKWQTELELGQGWNSLFWNNHDLPRVLSIWGNTGKYREKSAKALAILLHLMRGTPYIYQGEEIGMTNYPFKDLNELDDIESLNYAKEAFTNGKSMETIMDSIRMIGRDNARTPMQWDASQNAGFSTADKTWLPVNPNYKDINVQAALKNSNSIFYTYQQLIQLRKENDWLVDADFELLPTADKVFAYLR-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZIC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119431 for 3748 contacts (-31.9/contact) +
2D Compatibility (PS) -49254 + (NN) -34710 + (LL) 5124
1D Compatibility (HY) -39600 + (ID) 8350
Total energy: -246221.0 ( -65.69 by residue)
QMean score : 0.488
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