Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFRENVLEILEEITETDEVVQNTNIKLF-DEGLLDSMATVQLLIEIEEKLDITVPVSEFDR---------DEWATPEMIITQLEALK
2KW2 Chain:A ((4-86))
--TFDRVATIIAETCDIPRETITPESHAIDDLG-IDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLAARIDE--
General information:
TITO was launched using:
RESULT:
Template:
2KW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31240 for 502 contacts (-62.2/contact) +
2D Compatibility (PS) -7706 + (NN) -1695 + (LL) 768
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -43573.0 ( -86.80 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_2KW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KW2-query.scw
PDB file :
Tito_Scwrl_2KW2.pdb
: