Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKHYQIAIDQSTSGTKVLLFKE-GKLVDRLDKKHRQLYPKKGWVEHNPIEICQNVRTLIADILTKHDLITADIERLALTNQRETIVAWDKQTGKPLYNAIVWQCNRTKEICETLKEAGYEKRIKQLTGLKIDSYFSASKMMWLLENISAVRDAASRNQLAFGTMDAWLLFSLTDDSN---YFTDRTNASRTLLYDIEKNDWSDELLELFGVKRAYLPEVKQSAGSFGSYQE------IPIHSVMADSEAALYGQGCDTFGAVKATLGTGCSVMMQIGENRLPENDAILTTLAWDVAGVNQ-FALEGIIRSCGDTLVFLSEQLELFNDYDTACKRAFQLPCNEGVVLIPGQLGLGAPYWNTDIRAEILGLTREHTKWHIIRAGFTSIAFQIKAVIDQMELMIGQNIKRLQVDGGLTKQHELMQYLADVLKAEVAVSPAEELSAIGAI--------------EIADNNLQNKRTIAKLYQPSITHTHALEDFQEWEKQVKSSILKIQKVRNFK |
| 2D4W Chain:B ((3-495)) | ----YVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTHEDIAAVGITNQRETAVVWDKTTGKPVYNAIVWQDTRTQKIVDELGGDEGAEKYKSIVGLPLATYFSGPKIKWILDNVEGAREKAEKGDLLFGNTDTWVLWNMTGGTEGGVHVTDVTNASRTMLMDLDTLSWREDIAADMGIPLSMLPDIRSSSEVYGHGRPRGLVPGVPIAGILGDQQAATFGQACFEVGQAKNTYGTGNFLLLNTGTEKVMSKNGLLTTVCYKIGDAPAVYALEGSIAVTGSLVQWLRDNLGMFEDAPDVEWLAGKVQDNGGAYFVPAFSGLFAPYWRPDARGALVGLTRYVNRNHIARAALEATAFQSREVVDAMNADSGVDLTELRVDGGMVANELLMQFQADQLGVDVVRPKVAETTALGAAYAAGIAVGFWKGEQDVIDNWAEDKR-----WSPSMESGERERLYRNWKKAVTKTM---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254390 for 4223 contacts (-60.2/contact) +
2D Compatibility (PS) -49322 + (NN) -14255 + (LL) 2056
1D Compatibility (HY) -31200 + (ID) 8350
Total energy: -355461.0 ( -84.17 by residue)
QMean score : 0.399
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