Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-LNNKTSWIEELKEKRMAYGLSQNKLAVASGITRQYLSDIE-------NEKVIPTEQVKTALLDSLERFNPDNPLEMLFDYVRIRFPTDNVEKIIEEILHLNIDYMIHEDFGYYSYPEHYRFGDIMVMVSYDITKGVLLELKGKGCRQYENFLLAQHRSWYDFFTDCLEVNGVFKRLDLAINDKVGILDIPELARKSEQEECISIFRTFKNYRSGELVHRDEKSDMGNTLYIGSLKSEVY---FCIYEKDYEQFIKNDIPLEDPEVKNRFEIRLKNDRATHAIQDLLAYRNAEKTAFEIINRYIRFADKDTTKRRSQWQTSERWEWFIGKNRGELRLTTKPEPYSYERTLNWLRHQVAPTLKVASILDVLNE-TDIIPAMIRDANLTEKHEKLIEQQNLAVEDVIV
4NTC Chain:A ((2-326))MSIGKLLSNGALLVDVLIIGAGPAGLSTATGLARQLHTAVVFDSGVYRNAKTQHMHNVLGWDHRNPAELRAAGRADLTTRYSTIQFQNSTIEAIRQVETN--------QLFEARDNEGHSWYGRKVVLAT--------------GVRDIPLDIEGYSECWANGIYHCLFCDGYEERG----QETVGVLALGPIAN---PARALHLARMALRLSESVTIYTNGNEQLAKEIQQAAEESPVGASGLKFEARPIRRFEKGD-------VAKTVIVHLGESESKTE--GFLVYN----PQTEVNGPFAKQLALNMTEGGD--------------------ILTTPPFYE------------TSVPGVFAVGDCATPLKAVTPAVSMGSLAAGGLVAQLQAQAL-------


General information:
TITO was launched using:
RESULT:

Template: 4NTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61279 for 2628 contacts (-23.3/contact) +
2D Compatibility (PS) -31896 + (NN) 6235 + (LL) 6772
1D Compatibility (HY) -4400 + (ID) 2600
Total energy: -87168.0 ( -33.17 by residue)
QMean score : 0.180

(partial model without unconserved sides chains):
PDB file : Tito_4NTC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NTC-query.scw
PDB file : Tito_Scwrl_4NTC.pdb: