Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------MDILQTANERMEQLAA-LM-NKDIEQKIPAGEKVKVGVDLGTSSIVFVVLDE----NNVPLFG-AFEF-ADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASGAI-PPGTVGNNKKVVANVIESAGMEALYTIDEPTAAAAVLDLQNG-------AVVDVGGGTTGISVFENGEVIYTADEPTGGTHMTLVLAGYYGVPVEEAEQNKRAQKDSSEHF-SVMRPVVEKMAEITRVHLEKSPSEPLYIVGGASAYSQFKDTFESYLKMPVF--------------------QPNYPQYVTPLGIAMSSGSENL |
| 2YCH Chain:A ((11-375)) | PRVEALGLEIGASALKLVEVSGNPPALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLEARTRKRYVVTALSNLAVILRPIQVPKMPLKEMEEAVRWEAERYIPFPIEVVLDFAPLTPLSE--VQEGEQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIARSFNLDLLAAEEVKRTYGRIYDAIRPVLVELTQELRRSLEFFRIQLSPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFESEQLQEIGPEFAVALGLALRGVEP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79780 for 1979 contacts (-40.3/contact) +
2D Compatibility (PS) -28626 + (NN) -1187 + (LL) 128
1D Compatibility (HY) -5200 + (ID) 1850
Total energy: -116515.0 ( -58.88 by residue)
QMean score : 0.360
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