Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLGNDWDELLKNEFNQPYYLTLRQFLKKEYQT-KKVFPDMYDIFNALKHTAYKDVKVVILGQDPYHGPGQAHGLSFSVQQGVQI-PPSLQNIYLELHNDLNCEIPNNGYLIPWADQGVLLLNTVLTVRAGQANSHRGQGWEILTNHIIEIINQKEEPVVFLLWGSNAKEKLQLLTNPKHTAFTSVHPSPLSASRGFMGCKHFSKTNQFLEQNGVKPIDWQIPSI
4WS2 Chain:A ((41-238))
-------------------------QFLRAEIAAGRRYLPAGSNVLRAFTFP-FDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP--
General information:
TITO was launched using:
RESULT:
Template:
4WS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87877 for 1574 contacts (-55.8/contact) +
2D Compatibility (PS) -21047 + (NN) -7709 + (LL) 1988
1D Compatibility (HY) -16800 + (ID) 4500
Total energy: -135945.0 ( -86.37 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_4WS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WS2-query.scw
PDB file :
Tito_Scwrl_4WS2.pdb
: