Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVKSNIVKIGVCFAVLAVPVSQTTLPVFAAEQPGLKASQDNVNIPDSTFKAYLNGLLGQA-STANITEAQMDSLTYITLANINVTDLTGIEYAHNIKDLTINNIHATNYNQISGLSNLERLRIMGADVTSDKIPNLSGLTNLTLLDLSHSAHDDSILTKINTLPKVTSIDLSYNGAITDIMPLKTMPELKSLNIQFDGVHDYRGIEDFPKLNTLLAYSQTIGGKKLINSDIKSSKLTYNAENQTLYVPFSLMTERTVNYDGYVPDFVKSTASSDTYFTMNEQQVNGNRLTITSDGLTVSDVSKTDFDNLEKMEYNARIDLSYQSYNTPEQFQNGGSYTISMPIYDHYFTVDHSLNITADSEKTYIENQLVTEATFLSDIHAKTDDGSTVTSDFADKVDFNTPGTYTVTLQSENNAGLKATPVQVNVTIKAKTTITADEKITYKVDTSKTEAAFLADIKATTNDGTAITSDFATVVDLSKPGKYVVTLNAENDLQKALPVQVMVIVEKETPIPDPTPTPTPDPTPTPDPSPTPNPVINPNVNKPEVPSYKIPSLTVNEKKAKAEPSKEALPKTGDSLPVAGATVGFLLIGLSWFVSRKK |
1H6T Chain:A ((45-224)) | -----------------------------------------KQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSS--LKDLKKLKSLSLEHNGI--SDINGLVHLPQLESLYLGNN-KITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1H6T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -141757 for 1372 contacts (-103.3/contact) +
2D Compatibility (PS) -18433 + (NN) -2122 + (LL) 21400
1D Compatibility (HY) -13200 + (ID) 2200
Total energy: -156312.0 ( -113.93 by residue)
QMean score : 0.439
|
|
|