Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRQTMTFIPTLKEVPADAEVKSHQLLLRA-GFIRQ---TASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKD-RASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRP-RFGLLRGREFIMKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLE-FRSVIADSGSIGGNESKEFMALSDIGEDTIAYSDASDYAANTEMAPVLYMEKKSHELEKDLEKVATPDQKSITDIVGFLEVPIEKTMKSMLYQVDDEVIMVLVRGDHEVNDIKIKNALDATNVELVDPAVAVELLGANFGSLGPINVPENMRVFADNAVKDIVNAVVGANEDGFHYINVNPDRDFSVTSYFDLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGR-AQPII-MGCYGIGVSRILSAIAEQSNDENGFVWDKQISPFDLHLIPVNMKSEEQVAFAETLYTSLQDAGFSVLIDDRAERAGVKFADADLIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTLPILFGDK |
| 1NYR Chain:A ((237-641)) | ----------------ERKERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRP-DQIKEEFKRVVNMIIDVYKDFGFEDYSFRLS-YRDPED--KEKYF----------------DDDDMWNKA--------------------------------------ENMLKEA---------------------------ADELGL------SYEEAIG-EAAFYGPKL-----------------DVQ---------VKTA-MGKEET---------------L----STAQ--------LDFLLPERFDLTY----IGQDGEHHRPVVIHRGVVSTMERFVAFLTEETK----GAFPTWLAPKQVQIIPVNV--DLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIRL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154381 for 3206 contacts (-48.2/contact) +
2D Compatibility (PS) -43195 + (NN) -14644 + (LL) 11204
1D Compatibility (HY) -14400 + (ID) 3900
Total energy: -219316.0 ( -68.41 by residue)
QMean score : 0.471
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