Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFKRIFKAEHGEHGMSKSMHGRGAEDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGRGGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAARPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIVHVIDMSGSEGRVPYEDYMAINNELEQY--NLRLMERPQIIVANKMDMPDAEENLNEFKTKI----------AEDIPVFPISAVTKTGLRELLLAIADKLETTPEFPLNEILEQEDEDTVLYKYVAEEPDFEISREPDGTFVLSGAKIERLFTMTNFERDASISRFARQLRAMGVDEALRKRGAKDGDIVRLLDYEFEFMD |
1M2O Chain:B ((24-190)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------GKLLFLGLDNAGKTTLLHMLKNDRLA---TLQPTWHPTSEELAIG-NIKFTTFDLGG-------HIQARRLWKDYFPEVNGIVFLVDAA------DPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAV-SEAELRSALGLLNTTGIEGQRPVEVFMCSVVMRNGYLEAFQWLSQYI----------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M2O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85213 for 1189 contacts (-71.7/contact) +
2D Compatibility (PS) -16456 + (NN) -3880 + (LL) 16116
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -97983.0 ( -82.41 by residue)
QMean score : 0.521
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