Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -VLQTEMKVIQQTEIADKVYELILTGECVAGM-SPGQFLMLKPSRSDLLMRRPISICSYDKTAKTCILLYRVEGD--GTRDFSKLSEGDTIDVLGPLGKGFDIDTTPAPKTALLIGGGIGVPPMYQLGKELAEKGVQVMFVNGFQSAKDSFYAQEMAEYG--TVHIATVDGSLGTQGFVTDITKNFPEEPDVIYSCGPKAMLQAVKASF-PETKTYLSLEERMACGIGACYACVCPKADDTNKQFKVCEDGPVFRADEVKL |
1EP3 Chain:B ((2-262)) | SQLQEMMTVVSQREVAYNIFEMVLKGTLVDEMDLPGQFLHLAVPNGAMLLRRPISISSWDKRAKTCTILYRIGDETTGTYKLSKLESGAKVDVMGPLGNGFPVAEVTSTDKILIIGGGIGVPPLYELAKQLEKTGCQMTILLGFASENVKILENEFSNLKNVTLKIATDDGSYGTKGHVGMLMNEIDFEVDALYTCGAPAMLKAVAKKYDQLERLYISMESRMACGIGACYACVEHDKEDESHALKVCEDGPVFLGKQLSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158059 for 2166 contacts (-73.0/contact) +
2D Compatibility (PS) -27577 + (NN) -10640 + (LL) 0
1D Compatibility (HY) -29600 + (ID) 5850
Total energy: -231726.0 ( -106.98 by residue)
QMean score : 0.489
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