Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGAKKPLFEVIASEIKDSINRDEYKTGMLMPNETAL-QEIFSSSRTTIRRAVDLLVEEGLVVRKNGVGLYVQPKLTSQNILEMTGVMKTDTNENLKKDIKDFYIRKAGKFYAEKFGIK-ENELVYSIKFVQKSENGVTLDRLILPLSLYPDLQAKDFQIINIIELVNSGKYKLFELEQELQLILAGNEQIKNMHINENDPVFKLSSVFYAENEMPIAIQYHYEDAESTKYVVDFN- |
| 3BWG Chain:A ((8-236)) | --------QQIATEIETYIEEHQLQQGDKLPVLETLMAQ-FEVSKSTITKSLELLEQKGAIFQVRGSGIFVRKHKRKGYISLLSNQ----GDFNVTSKVIELDVRKPTPEAAENLNIGMDEDIYYVKRVRYINGQTLCYEESYYTKSIVTYLNNEIVSHSIFHYIREGLGLKIGFSDLFLHVGQLNEEEAEYLGLEAGLPKLYIESIFHLTNGQPFDYSKISYNYEQSQFVVQANS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BWG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83774 for 1553 contacts (-53.9/contact) +
2D Compatibility (PS) -23717 + (NN) -2954 + (LL) 928
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -120317.0 ( -77.47 by residue)
QMean score : 0.460
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