Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METVLQAKNVRKIYGSKGNVYTALENISIDIKEGEFTGIMGPSGAGKSTLLNVLSTIDKPTSGQIVISGQELE----NMNEQQMSTFRRDKLGFIFQDYNLLDTLTIRENIIL-PLALAKRPVKEMEEKLAIISEKFGITEILDKYPSEISGGQKQRTAASRAIITSPSLIFADEPTGALDSKSATNLLESLRDLNEQDKSTIMMVTHD-AFAASFCKRILFIKDGELYTEIYRGTKTRKEFFQKILDVLAKLGGDSDDVI |
2OLK Chain:C ((22-240)) | ----LQMIDVHQLKKSFGSL-EVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNKV------REEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQL-ANEGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEE------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2OLK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -79973 for 1748 contacts (-45.8/contact) +
2D Compatibility (PS) -23288 + (NN) -9930 + (LL) 3112
1D Compatibility (HY) -20000 + (ID) 3850
Total energy: -133929.0 ( -76.62 by residue)
QMean score : 0.461
|
|
|