Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LKVDSLSKKIDG----KLLLDKITFEVKPGEIIGIVGRNGVGKTTLFRTIMGFYIPDAGDVYLD-EPLSK-----NHQLKQKLFMLQDNLNCWDGYKIPTIKKFYQKTYPLFD---GDKFDNLMKQVNLAK--DVKFQNYSKGMKGLFGLVLALSIGAEFILLDEPMEGLDIIAQKKIMGILLEEVEKRKLGIIISSHRLADLDPIADYIHILQDNHIEESYHLESLREQAVKIQIAFENKKIPHFLLENGKVINKYGRVYTILFRDMNTELYAAIKKEKPIFMDELAVTLEDLFIYHLEEQGGEKL |
3TUI Chain:C ((25-254)) | IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSH----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155045 for 1749 contacts (-88.6/contact) +
2D Compatibility (PS) -23125 + (NN) -9276 + (LL) 6828
1D Compatibility (HY) -13200 + (ID) 2150
Total energy: -195968.0 ( -112.05 by residue)
QMean score : 0.557
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