Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------MTHIKFDYSKALRFFEERELDYLEPAVK-----AAHDSLHNG---TGAGNDALGWINL--------------PTDYDKEEFARIKKATEKIHSDS---------DVLIVIGIGGSYLGARAAIETLNHSFYNVLEKGARKTPQVFFAGNSISSSYLHDLIEVVGDRDFSVNVISKSGTTTEPAIAFRVFKELLIKKYGEEGAKKRIYATTDKAKGALKTLSDNEGYETFVVPDDVGGRFSVLTAVGL-LPIAVSGVDIDALMNGAAAASKDFDKPELKNNIAYQYAAARNVLYR--KGKVTELLISYEPGLQYFNEWWKQLFGESEGKD----------KKGIYPSSANFSTDLHSIGQYIQDGRRNLFETVIKVDKPR------HNLTINKEDVDLDGLNYLAGETVDFVNTKA--------FEGTLLAH--TDGEVPNFVVEVPELDAYTFGYLVYFFEKAVAISGYLNGVNPFDQPGVEAYKANMFALLGKPGFEDKKAELEKRLND------------ |
| 1DQR Chain:A ((1-555)) | AALTRNPQFQKLQQWHREHGSELNLRHLFDTDKERFNHFSLTLNTNHGHILLDYSKNL--VTEEVMHMLLDLAKSRGVEAARESMFNGEKINSTEDRAVLHVALRNRSNTPIVVDGKDVMPEVNKVLDKMKAFCQRVRSGDWKGYTGKTITDVINIGIGGSDLGPLMVTEAL--------KPYSSGGPRVWFVSN-IDGTHIAKTLACLNPESSLFIIASKTFTTQETITNAKTAKDWFLLSAKDPSTVAKHFVALSTNTAKVKEFGIDPQN-MFEFWDWVGGRYSLWSAIGLSIALHVGFDNFEQLLSGAHWMDQHFRTTPLEKNAPVLLAML-GIWYINCFGCETQAVLPYDQYLHRFAAYFQQGDMESNGKYITKSGARVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHKILLANFLAQTEALMKGKSTEEARKELQAAGKSPEDLMKLLPHKVFEGNRPTNSIVFTKLTPFILGALIAMYEHKIFVQGVVWDINSFDQWGVELGKQLAKKIEPELDGSSPVTSHDSSTNGLINFIKQQREAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DQR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156656 for 3517 contacts (-44.5/contact) +
2D Compatibility (PS) -47958 + (NN) -27387 + (LL) 856
1D Compatibility (HY) -17600 + (ID) 4850
Total energy: -253595.0 ( -72.11 by residue)
QMean score : 0.450
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