Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYFQEARLIHVELPLIAPFKTSYGELNSKDFYIIELVNEEGIRGYGELEAFPLPDYTEETLSTAISIVKQHLLPILAQKEIRTPQEINQMFSWIQGNEMAKAAVELAVWDAFAKNEKLSLAKMIGAEKDSIAVGVSIG--LQPDAETLVRLVSQYMDEGYERVKLKIAPK---KDIQFVKAVREKFPN-LSLMADANSAYNRED-FWLLKELDHFNLEMIEQPFGAKDFVDHAWLQKKLKTRICLDENIRSLDDLKQAHMLGSCQAVNLKLARVGGMSEALKIAKYCSDNNLLVWCGGMLEAGIGRAHNIALAARAEFTFPGDISASNRYFNKDIVSPAFVLNQGKLTVPTGQGIGVALDLDVLQKYTKSTERILLNKGWS |
| 2PP0 Chain:C ((131-314)) | ---------------------------------------------------------------------------------------------------AISPIDIALWDMKAKRAGLPLAKLLGAHRDSVQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFNLIWIEEPLDAYDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGISPFLKI-------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74555 for 1275 contacts (-58.5/contact) +
2D Compatibility (PS) -19086 + (NN) -10728 + (LL) 13740
1D Compatibility (HY) -11200 + (ID) 3000
Total energy: -104829.0 ( -82.22 by residue)
QMean score : 0.472
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