Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKKVAMGITVVMASSLLLVGCGSSDDSSKDKKSTDTKQTETKKTAKTDGTMTDGTYKLEEKNFDDKGWKGFMSIEVKDGKITKANYDYKNKDGKLKSEDADYEKAMKDKVGTG--PQEYLKQLSDSLVKNQSAASVEVVSGATHSSDAFINYANQLIQAAQKADTTTISINNLAKMEDGTYKLEEQNYAHGYRV---VFSMDVKDGKITKSDYNYVDKDGKLKSDDADYEKNMKAKSGTGPKEYIPALNKS-LVEKQDVAAVDTVSGATNSSNQFKIYAAQLQNAAQNGNTDTIKVYNLVEAE--------- |
| 1THF Chain:D ((1-253)) | MLAKRIIACLDVKDGRVVKGSN------------------------FENLR--DSGDPVELGKFYSEIGID-ELVFLDITASVE------KRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILR-----GADKVSINTAAVENP----SLITQIAQTFGSQA-VVVAID--AKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT------LPIIASGGAGKMEHFLEAFLA----------GADAALAASVFHFREIDVRELKEYLKKHGVNVRLEGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1THF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 92343 for 1991 contacts (46.4/contact) +
2D Compatibility (PS) -25443 + (NN) -1603 + (LL) 1688
1D Compatibility (HY) -800 + (ID) 1650
Total energy: 64535.0 ( 32.41 by residue)
QMean score : 0.139
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